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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Rice-Synthetic_map1
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps 12
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker Oryza
QTL
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Physical [ View Map Type Info ]
Map Set Name: Rice - Synthetic_map1 [ View Map Set Info ]
Map Name: 12
Map Start: 0 bp
Map Stop: 27,497,214 bp
Features by Type:
176 Marker Oryza
85 QTL
261 Total

Map Features

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Items 1 to 25 of 261.       of 11 | Next
Rice - Synthetic_map1 - 12
(Click headers to resort)		 Comparative Maps
Feature Type Position (bp) Map Feature Type Position Evidence Actions
C1589S Marker Oryza 3,430,418 - 3,430,705 No other positions
RG869 Marker Oryza 7,729,365 - 7,729,855 No other positions
ME7_9 Marker Oryza 18,867,450 - 18,867,702 No other positions
XNPB258 Marker Oryza 21,215,213 - 21,216,644 No other positions
E31151S Marker Oryza 8,076,099 - 8,076,503 No other positions
RZ261 Marker Oryza 21,197,183 - 21,197,308 No other positions
R3025S Marker Oryza 624,616 - 625,064 No other positions
G1391 Marker Oryza 5,805,195 - 5,805,475 No other positions
S14025 Marker Oryza 13,101,084 - 13,101,949 No other positions
C60015S Marker Oryza 6,732,349 - 6,733,237 No other positions
RM277 Marker Oryza 18,290,458 - 18,290,574 No other positions
C1336 Marker Oryza 3,026,656 - 3,027,282 No other positions
RG543 Marker Oryza 23,774,861 - 23,775,487 No other positions
ME6_12 Marker Oryza 18,867,450 - 18,867,702 No other positions
TEL12S Marker Oryza 1 No other positions
E30009S Marker Oryza 6,988,220 - 6,988,789 No other positions
RZ111 Marker Oryza 27,437,580 - 27,438,064 No other positions
RM247 Marker Oryza 3,185,384 - 3,185,581 No other positions
R2984 Marker Oryza 337,533 - 339,082 No other positions
G1225 Marker Oryza 5,486,233 - 5,486,455 No other positions
S13752 Marker Oryza 15,776,774 - 15,777,219 No other positions
C53903S Marker Oryza 22,017,384 - 22,017,719 No other positions
C11831S Marker Oryza 16,704,927 - 16,706,725 No other positions
RG457 Marker Oryza 19,628,481 - 19,628,925 No other positions
ME10_3 Marker Oryza 21,197,183 - 21,197,308 No other positions